STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF48551.1Glycosyltransferase involved in cell wall bisynthesis. (407 aa)    
Predicted Functional Partners:
SDF48511.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
 0.951
SDF49008.1
Glycosyl transferase family 2.
  
 0.866
SDF48909.1
Hypothetical protein.
 
 
 0.865
SDF48603.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.833
SDF14906.1
UDP-glucose pyrophosphorylase.
    
 0.827
SDF48471.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.822
SDF48961.1
Polymer biosynthesis protein, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
 
 0.821
SDF48856.1
Acyl transferase domain-containing protein.
  
  
 0.789
SDF48775.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
 
  
 0.787
SDF48640.1
Hypothetical protein.
  
  
  0.772
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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