STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF49530.1Hypothetical protein. (726 aa)    
Predicted Functional Partners:
SDF16879.1
Serine phosphatase RsbU, regulator of sigma subunit.
   
 
  0.797
SDF81944.1
Sporulation related domain-containing protein.
 
     0.754
SDF95698.1
Hypothetical protein.
  
     0.754
SDF75287.1
Hypothetical protein.
  
    0.735
SDF96791.1
Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family.
  
     0.734
SDF49142.1
Haem-NO-binding.
   
    0.721
SDF49488.1
Thiamine diphosphokinase.
       0.718
SDF63319.1
Hint domain-containing protein.
  
 
  0.704
SDG48848.1
Hint domain-containing protein.
  
  
  0.704
SDF75343.1
Flp pilus assembly protein TadG.
  
    0.702
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.