STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF50778.1Hypothetical protein. (281 aa)    
Predicted Functional Partners:
SDF50841.1
Putative DNA-binding domain-containing protein.
  
 0.997
SDF50737.1
Uncharacterized membrane protein.
 
  
 0.991
SDF50884.1
Putative oxidoreductase.
 
  
 0.987
SDF56116.1
Hemolysin-type calcium-binding repeat-containing protein.
   
    0.852
SDF36242.1
Putative oxidoreductase.
  
  
 0.785
SDG73141.1
Type IV secretion system protein VirB3.
   
    0.747
SDH00551.1
Type IV secretion system protein VirB3.
   
    0.747
SDF02510.1
Hemolysin-type calcium-binding repeat-containing protein.
   
    0.648
SDG22963.1
Ca2+-binding protein, RTX toxin-related.
   
    0.648
SDG09182.1
Type IV secretion system protein VirB4.
   
    0.579
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.