STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF57016.1Dimethylamine/trimethylamine dehydrogenase. (697 aa)    
Predicted Functional Partners:
SDG82754.1
Glutamate synthase (NADPH) large subunit.
  
 0.999
SDE98322.1
Electron transfer flavoprotein beta subunit.
  
 
 0.991
SDH02219.1
Electron transfer flavoprotein beta subunit.
  
 
 0.991
SDH02323.1
Glutamate synthase conserved region-containing protein.
  
 0.983
SDH02429.1
Glutamate synthase conserved region-containing protein.
  
 0.983
SDF22486.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 0.964
SDG86805.1
Reductive dehalogenase.
   
 0.964
SDG29835.1
Vanillate O-demethylase ferredoxin subunit.
   
 0.961
SDE98357.1
Electron transfer flavoprotein alpha subunit apoprotein.
   
 
 0.935
SDH02253.1
Electron transfer flavoprotein alpha subunit apoprotein.
   
 
 0.935
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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