STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF75989.1Capsular polysaccharide export protein. (674 aa)    
Predicted Functional Partners:
SDF76026.1
Polysaccharide export outer membrane protein.
 
  
 0.990
SDG41626.1
Capsular polysaccharide transport system permease protein.
 
  
 0.974
SDG41673.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.974
SDF15076.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.973
SDF76061.1
Capsular polysaccharide export protein.
   
 0.959
SDG82232.1
Polysaccharide export outer membrane protein.
 
  
 0.921
SDF14800.1
Glycosyl transferase family 2.
 
    0.765
SDF14758.1
Core-2/I-Branching enzyme.
  
     0.752
SDG01424.1
Hypothetical protein.
 
     0.729
SDF14716.1
LPS sulfotransferase NodH.
  
     0.711
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.