STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG02418.1Small-conductance mechanosensitive channel. (777 aa)    
Predicted Functional Partners:
SDG02381.1
Cysteine synthase A.
       0.806
SDG02452.1
Ala-tRNA(Pro) hydrolase.
       0.806
SDG02293.1
Hypothetical protein.
       0.768
SDG00244.1
Multiple antibiotic resistance protein.
  
    0.751
SDG02338.1
Nudix-type nucleoside diphosphatase, YffH/AdpP family.
  
    0.741
SDG02255.1
Cyclopropane-fatty-acyl-phospholipid synthase.
       0.665
SDF18364.1
Double-strand break repair protein AddB.
  
     0.521
SDG02222.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
       0.506
SDG42258.1
Putative membrane protein.
  
     0.450
SDF18532.1
PAS fold.
  
     0.428
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.