STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG06221.1Bile acid:Na+ symporter, BASS family. (298 aa)    
Predicted Functional Partners:
SDG06190.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
     0.960
SDG06253.1
UDP-glucose 4-epimerase.
 
 
   0.955
SDG06286.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.948
SDG06161.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.822
SDG06350.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
  
    0.629
SDG06318.1
DNA-binding transcriptional regulator, MarR family.
       0.623
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.