STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG18836.1Capsid portal protein. (426 aa)    
Predicted Functional Partners:
SDG19112.1
Hypothetical protein.
 
    0.951
SDG19340.1
Hypothetical protein.
 
    0.945
SDG19210.1
Phage tail protein, P2 protein I family.
 
    0.939
SDG18794.1
Mu-like prophage FluMu protein gp28.
 
    0.918
SDG19164.1
Phage-related baseplate assembly protein.
 
    0.900
SDG19071.1
Phage baseplate assembly protein V.
 
    0.876
SDG18884.1
Putative phage serine protease XkdF.
  
    0.875
SDG19637.1
Hypothetical protein.
 
    0.833
SDG19549.1
Hypothetical protein.
 
    0.832
SDG19379.1
Hypothetical protein.
 
    0.825
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.