STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG16545.1NTE family protein. (344 aa)    
Predicted Functional Partners:
SDG16598.1
3-hydroxybutyrate dehydrogenase.
 
  
  0.877
SDF50470.1
Polyhydroxyalkanoate synthase.
 
   
 0.636
SDG07218.1
Type IV secretion system protein VirD4.
    
   0.482
SDG73771.1
Type IV secretion system protein VirD4.
    
   0.482
SDH00052.1
Type IV secretion system protein VirD4.
    
   0.482
SDH09738.1
Type IV secretion system protein VirD4.
    
   0.482
SDF50380.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
     0.473
SDF97679.1
Phospholipase/carboxylesterase.
 
  
  0.434
SDF64084.1
Alpha/beta hydrolase family protein.
     
 0.433
SDF95505.1
Alpha/beta hydrolase family protein.
    
 0.423
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
Server load: low (24%) [HD]