STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG28257.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (361 aa)    
Predicted Functional Partners:
SDG28179.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.999
SDG28219.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.999
SDG28098.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.996
SDG39492.1
Sorbitol ABC transporter membrane protein.
 
 0.990
SDG39526.1
Sorbitol ABC transporter membrane protein.
 0.989
SDG39452.1
Sorbitol-binding protein /mannitol-binding protein.
  
 0.972
SDG28138.1
Predicted small integral membrane protein.
 
    0.948
SDG28293.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  
 
0.912
SDG28331.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.822
SDG28368.1
Transcriptional regulator, DeoR family.
 
   
 0.698
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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