Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF00062.1 | SDG28606.1 | SAMN04489759_101126 | SAMN04489759_10642 | Threonine/homoserine/homoserine lactone efflux protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.683 |
SDG28538.1 | SDG28575.1 | SAMN04489759_10640 | SAMN04489759_10641 | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family. | 0.955 |
SDG28538.1 | SDG28606.1 | SAMN04489759_10640 | SAMN04489759_10642 | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | Threonine/homoserine/homoserine lactone efflux protein. | 0.457 |
SDG28575.1 | SDG28538.1 | SAMN04489759_10641 | SAMN04489759_10640 | Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family. | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.955 |
SDG28575.1 | SDG28606.1 | SAMN04489759_10641 | SAMN04489759_10642 | Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family. | Threonine/homoserine/homoserine lactone efflux protein. | 0.550 |
SDG28606.1 | SDF00062.1 | SAMN04489759_10642 | SAMN04489759_101126 | Threonine/homoserine/homoserine lactone efflux protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.683 |
SDG28606.1 | SDG28538.1 | SAMN04489759_10642 | SAMN04489759_10640 | Threonine/homoserine/homoserine lactone efflux protein. | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.457 |
SDG28606.1 | SDG28575.1 | SAMN04489759_10642 | SAMN04489759_10641 | Threonine/homoserine/homoserine lactone efflux protein. | Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family. | 0.550 |
SDG28606.1 | SDG60788.1 | SAMN04489759_10642 | SAMN04489759_109114 | Threonine/homoserine/homoserine lactone efflux protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.684 |
SDG60788.1 | SDG28606.1 | SAMN04489759_109114 | SAMN04489759_10642 | Threonine/homoserine/homoserine lactone efflux protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.684 |