STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG60302.1Hypothetical protein. (107 aa)    
Predicted Functional Partners:
SDG60341.1
OmpA-OmpF porin, OOP family.
 
     0.913
SDF73799.1
Hypothetical protein.
  
     0.766
SDG22663.1
Hypothetical protein.
  
     0.763
SDG16908.1
Hypothetical protein.
  
     0.761
SDG61128.1
Hypothetical protein.
  
     0.761
SDF52917.1
Hypothetical protein.
  
     0.759
SDG60454.1
Hypothetical protein.
 
     0.759
SDG01180.1
Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB.
  
     0.753
SDG41909.1
SseB protein N-terminal domain-containing protein.
  
     0.748
SDF50424.1
Phasin protein.
  
     0.743
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.