STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG58311.1ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (261 aa)    
Predicted Functional Partners:
SDG58376.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
 
 0.995
SDG58343.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 0.989
SDG90961.1
NitT/TauT family transport system ATP-binding protein.
 
 0.948
SDG91112.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.947
SDG86922.1
NitT/TauT family transport system ATP-binding protein.
 
 0.920
SDG58278.1
YKOF-related Family.
 
     0.800
SDG86847.1
NitT/TauT family transport system substrate-binding protein.
  
 
 0.777
SDG90998.1
NitT/TauT family transport system permease protein.
 
  
 
0.775
SDG86959.1
NitT/TauT family transport system permease protein.
  
  
 
0.511
SDF48775.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 
 0.509
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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