Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG26496.1 | SFH36008.1 | SAMN04488039_101292 | SAMN04488039_1078 | Sulfur dehydrogenase subunit SoxD. | Cytochrome aa3-600 menaquinol oxidase subunit 2. | 0.991 |
SFG26496.1 | SFH36030.1 | SAMN04488039_101292 | SAMN04488039_1079 | Sulfur dehydrogenase subunit SoxD. | Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
SFG26496.1 | SFH36076.1 | SAMN04488039_101292 | SAMN04488039_10711 | Sulfur dehydrogenase subunit SoxD. | DNA-binding transcriptional regulator, MarR family. | 0.464 |
SFG26496.1 | SFH36116.1 | SAMN04488039_101292 | SAMN04488039_10713 | Sulfur dehydrogenase subunit SoxD. | Cytochrome P450. | 0.464 |
SFH36008.1 | SFG26496.1 | SAMN04488039_1078 | SAMN04488039_101292 | Cytochrome aa3-600 menaquinol oxidase subunit 2. | Sulfur dehydrogenase subunit SoxD. | 0.991 |
SFH36008.1 | SFH36030.1 | SAMN04488039_1078 | SAMN04488039_1079 | Cytochrome aa3-600 menaquinol oxidase subunit 2. | Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
SFH36008.1 | SFH36051.1 | SAMN04488039_1078 | SAMN04488039_10710 | Cytochrome aa3-600 menaquinol oxidase subunit 2. | Hypothetical protein. | 0.946 |
SFH36008.1 | SFH36076.1 | SAMN04488039_1078 | SAMN04488039_10711 | Cytochrome aa3-600 menaquinol oxidase subunit 2. | DNA-binding transcriptional regulator, MarR family. | 0.495 |
SFH36008.1 | SFH36095.1 | SAMN04488039_1078 | SAMN04488039_10712 | Cytochrome aa3-600 menaquinol oxidase subunit 2. | MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein. | 0.495 |
SFH36030.1 | SFG26496.1 | SAMN04488039_1079 | SAMN04488039_101292 | Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family. | Sulfur dehydrogenase subunit SoxD. | 0.999 |
SFH36030.1 | SFH36008.1 | SAMN04488039_1079 | SAMN04488039_1078 | Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family. | Cytochrome aa3-600 menaquinol oxidase subunit 2. | 0.999 |
SFH36030.1 | SFH36051.1 | SAMN04488039_1079 | SAMN04488039_10710 | Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family. | Hypothetical protein. | 0.908 |
SFH36030.1 | SFH36076.1 | SAMN04488039_1079 | SAMN04488039_10711 | Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family. | DNA-binding transcriptional regulator, MarR family. | 0.495 |
SFH36030.1 | SFH36095.1 | SAMN04488039_1079 | SAMN04488039_10712 | Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family. | MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein. | 0.507 |
SFH36030.1 | SFH36116.1 | SAMN04488039_1079 | SAMN04488039_10713 | Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family. | Cytochrome P450. | 0.660 |
SFH36051.1 | SFH36008.1 | SAMN04488039_10710 | SAMN04488039_1078 | Hypothetical protein. | Cytochrome aa3-600 menaquinol oxidase subunit 2. | 0.946 |
SFH36051.1 | SFH36030.1 | SAMN04488039_10710 | SAMN04488039_1079 | Hypothetical protein. | Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family. | 0.908 |
SFH36051.1 | SFH36076.1 | SAMN04488039_10710 | SAMN04488039_10711 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.495 |
SFH36051.1 | SFH36095.1 | SAMN04488039_10710 | SAMN04488039_10712 | Hypothetical protein. | MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein. | 0.495 |
SFH36076.1 | SFG26496.1 | SAMN04488039_10711 | SAMN04488039_101292 | DNA-binding transcriptional regulator, MarR family. | Sulfur dehydrogenase subunit SoxD. | 0.464 |
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