STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF22404.1enoyl-CoA hydratase. (280 aa)    
Predicted Functional Partners:
SEF27159.1
Acyl-coenzyme A oxidase.
  
  0.936
SEF26716.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
0.914
SEF35350.1
acyl-CoA dehydrogenase.
   
  0.913
SEF26777.1
3-methylcrotonyl-CoA carboxylase beta subunit.
  
 
  0.909
SEF28875.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.908
SEF36953.1
crotonyl-CoA carboxylase/reductase.
    
  0.902
SEF37723.1
acyl-CoA dehydrogenase.
  
  0.851
SEF28982.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.841
SEF22402.1
acetyl-CoA synthetase.
  
 
  0.839
SEF34232.1
acyl-CoA dehydrogenase.
   
  0.824
Your Current Organism:
Amycolatopsis pretoriensis
NCBI taxonomy Id: 218821
Other names: A. pretoriensis, Amycolatopsis pretoriensis Labeda et al. 2003, DSM 44654, JCM 12673, NRRL B-24133, strain ARC OV1 0181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.