STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF27628.1Two-component system, OmpR family, sensor histidine kinase MprB. (472 aa)    
Predicted Functional Partners:
SEF27630.1
Two-component system, OmpR family, response regulator MprA.
 
 0.995
SEF37766.1
Two-component system, OmpR family, response regulator MprA.
 
 0.960
SEF32254.1
Two-component system, OmpR family, response regulator MprA.
 
 0.951
SEF32252.1
Two-component system, OmpR family, sensor histidine kinase MprB.
 
 
0.902
SEF26518.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.875
SEF35907.1
Two-component system, OmpR family, response regulator QseB.
 
 0.866
SEF37395.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.858
SEF35987.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.854
SEF26143.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.844
SEF30963.1
Two-component system, OmpR family, response regulator RegX3.
 
 0.838
Your Current Organism:
Amycolatopsis pretoriensis
NCBI taxonomy Id: 218821
Other names: A. pretoriensis, Amycolatopsis pretoriensis Labeda et al. 2003, DSM 44654, JCM 12673, NRRL B-24133, strain ARC OV1 0181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.