Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEF21129.1 | SEF23111.1 | SAMN05421837_101735 | SAMN05421837_10212 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.810 |
SEF21129.1 | SEF24983.1 | SAMN05421837_101735 | SAMN05421837_102955 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | GAF domain-containing protein. | 0.901 |
SEF21129.1 | SEF24986.1 | SAMN05421837_101735 | SAMN05421837_102957 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.977 |
SEF21129.1 | SEF26199.1 | SAMN05421837_101735 | SAMN05421837_103126 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.958 |
SEF21129.1 | SEF27557.1 | SAMN05421837_101735 | SAMN05421837_103932 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.866 |
SEF21129.1 | SEF30885.1 | SAMN05421837_101735 | SAMN05421837_105444 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.965 |
SEF21129.1 | SEF31249.1 | SAMN05421837_101735 | SAMN05421837_105651 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.986 |
SEF21129.1 | SEF37395.1 | SAMN05421837_101735 | SAMN05421837_113225 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.995 |
SEF21129.1 | SEF37711.1 | SAMN05421837_101735 | SAMN05421837_11562 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.885 |
SEF21129.1 | SEF38373.1 | SAMN05421837_101735 | SAMN05421837_1214 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.901 |
SEF23111.1 | SEF21129.1 | SAMN05421837_10212 | SAMN05421837_101735 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.810 |
SEF23111.1 | SEF24983.1 | SAMN05421837_10212 | SAMN05421837_102955 | PAS domain S-box-containing protein. | GAF domain-containing protein. | 0.948 |
SEF23111.1 | SEF24986.1 | SAMN05421837_10212 | SAMN05421837_102957 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.993 |
SEF23111.1 | SEF26199.1 | SAMN05421837_10212 | SAMN05421837_103126 | PAS domain S-box-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.993 |
SEF23111.1 | SEF27557.1 | SAMN05421837_10212 | SAMN05421837_103932 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.829 |
SEF23111.1 | SEF30885.1 | SAMN05421837_10212 | SAMN05421837_105444 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.944 |
SEF23111.1 | SEF31249.1 | SAMN05421837_10212 | SAMN05421837_105651 | PAS domain S-box-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.940 |
SEF23111.1 | SEF37395.1 | SAMN05421837_10212 | SAMN05421837_113225 | PAS domain S-box-containing protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.998 |
SEF23111.1 | SEF37711.1 | SAMN05421837_10212 | SAMN05421837_11562 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.827 |
SEF23111.1 | SEF38373.1 | SAMN05421837_10212 | SAMN05421837_1214 | PAS domain S-box-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.938 |
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