STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF34026.12-polyprenyl-6-methoxyphenol hydroxylase. (375 aa)    
Predicted Functional Partners:
SEF34024.1
Regulatory protein, tetR family.
 
     0.807
SEF33068.1
Ferredoxin-NADP reductase.
   
 
 0.629
SEF20021.1
Regulatory protein, tetR family.
 
     0.589
SEF37566.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.524
SEF37778.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.493
SEF32670.1
Kynureninase.
  
 
 0.489
SEF35065.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
   
 0.485
SEF37903.1
Regulatory protein, tetR family.
  
     0.479
SEF21758.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.462
SEF35961.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.462
Your Current Organism:
Amycolatopsis pretoriensis
NCBI taxonomy Id: 218821
Other names: A. pretoriensis, Amycolatopsis pretoriensis Labeda et al. 2003, DSM 44654, JCM 12673, NRRL B-24133, strain ARC OV1 0181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.