Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEF21466.1 | SEF35537.1 | SAMN05421837_101879 | SAMN05421837_108133 | DNA ligase D, 3'-phosphoesterase domain-containing protein. | DNA repair photolyase. | 0.417 |
SEF23365.1 | SEF35537.1 | SAMN05421837_102133 | SAMN05421837_108133 | Bifunctional non-homologous end joining protein LigD. | DNA repair photolyase. | 0.437 |
SEF35537.1 | SEF21466.1 | SAMN05421837_108133 | SAMN05421837_101879 | DNA repair photolyase. | DNA ligase D, 3'-phosphoesterase domain-containing protein. | 0.417 |
SEF35537.1 | SEF23365.1 | SAMN05421837_108133 | SAMN05421837_102133 | DNA repair photolyase. | Bifunctional non-homologous end joining protein LigD. | 0.437 |
SEF35537.1 | SEF35539.1 | SAMN05421837_108133 | SAMN05421837_108134 | DNA repair photolyase. | 2-Methylisocitrate lyase, PEP mutase family. | 0.668 |
SEF35537.1 | SEF35541.1 | SAMN05421837_108133 | SAMN05421837_108135 | DNA repair photolyase. | AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II. | 0.679 |
SEF35537.1 | SEF35542.1 | SAMN05421837_108133 | SAMN05421837_108136 | DNA repair photolyase. | Hypothetical protein. | 0.429 |
SEF35539.1 | SEF35537.1 | SAMN05421837_108134 | SAMN05421837_108133 | 2-Methylisocitrate lyase, PEP mutase family. | DNA repair photolyase. | 0.668 |
SEF35539.1 | SEF35541.1 | SAMN05421837_108134 | SAMN05421837_108135 | 2-Methylisocitrate lyase, PEP mutase family. | AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II. | 0.809 |
SEF35539.1 | SEF35542.1 | SAMN05421837_108134 | SAMN05421837_108136 | 2-Methylisocitrate lyase, PEP mutase family. | Hypothetical protein. | 0.487 |
SEF35541.1 | SEF35537.1 | SAMN05421837_108135 | SAMN05421837_108133 | AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II. | DNA repair photolyase. | 0.679 |
SEF35541.1 | SEF35539.1 | SAMN05421837_108135 | SAMN05421837_108134 | AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II. | 2-Methylisocitrate lyase, PEP mutase family. | 0.809 |
SEF35541.1 | SEF35542.1 | SAMN05421837_108135 | SAMN05421837_108136 | AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II. | Hypothetical protein. | 0.530 |
SEF35542.1 | SEF35537.1 | SAMN05421837_108136 | SAMN05421837_108133 | Hypothetical protein. | DNA repair photolyase. | 0.429 |
SEF35542.1 | SEF35539.1 | SAMN05421837_108136 | SAMN05421837_108134 | Hypothetical protein. | 2-Methylisocitrate lyase, PEP mutase family. | 0.487 |
SEF35542.1 | SEF35541.1 | SAMN05421837_108136 | SAMN05421837_108135 | Hypothetical protein. | AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II. | 0.530 |