Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEF37353.1 | SEF37354.1 | SAMN05421837_113181 | SAMN05421837_113182 | Hypothetical protein. | 4-amino-4-deoxy-L-arabinose transferase. | 0.558 |
SEF37353.1 | SEF37355.1 | SAMN05421837_113181 | SAMN05421837_113183 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.479 |
SEF37353.1 | SEF37356.1 | SAMN05421837_113181 | SAMN05421837_113184 | Hypothetical protein. | Signal transduction histidine kinase. | 0.479 |
SEF37354.1 | SEF37353.1 | SAMN05421837_113182 | SAMN05421837_113181 | 4-amino-4-deoxy-L-arabinose transferase. | Hypothetical protein. | 0.558 |
SEF37354.1 | SEF37355.1 | SAMN05421837_113182 | SAMN05421837_113183 | 4-amino-4-deoxy-L-arabinose transferase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.655 |
SEF37354.1 | SEF37356.1 | SAMN05421837_113182 | SAMN05421837_113184 | 4-amino-4-deoxy-L-arabinose transferase. | Signal transduction histidine kinase. | 0.655 |
SEF37355.1 | SEF37353.1 | SAMN05421837_113183 | SAMN05421837_113181 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.479 |
SEF37355.1 | SEF37354.1 | SAMN05421837_113183 | SAMN05421837_113182 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 4-amino-4-deoxy-L-arabinose transferase. | 0.655 |
SEF37355.1 | SEF37356.1 | SAMN05421837_113183 | SAMN05421837_113184 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.976 |
SEF37356.1 | SEF37353.1 | SAMN05421837_113184 | SAMN05421837_113181 | Signal transduction histidine kinase. | Hypothetical protein. | 0.479 |
SEF37356.1 | SEF37354.1 | SAMN05421837_113184 | SAMN05421837_113182 | Signal transduction histidine kinase. | 4-amino-4-deoxy-L-arabinose transferase. | 0.655 |
SEF37356.1 | SEF37355.1 | SAMN05421837_113184 | SAMN05421837_113183 | Signal transduction histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.976 |