Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEF32643.1 | SEF32650.1 | SAMN05421837_106360 | SAMN05421837_106364 | Dihydrofolate reductase. | RibD C-terminal domain-containing protein. | 0.566 |
SEF32643.1 | SEF35970.1 | SAMN05421837_106360 | SAMN05421837_109127 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.402 |
SEF32643.1 | SEF37358.1 | SAMN05421837_106360 | SAMN05421837_113186 | Dihydrofolate reductase. | 5-amino-6-(5-phosphoribosylamino)uracil reductase. | 0.486 |
SEF32643.1 | SEF37757.1 | SAMN05421837_106360 | SAMN05421837_115108 | Dihydrofolate reductase. | RibD C-terminal domain-containing protein. | 0.432 |
SEF32643.1 | SEF37831.1 | SAMN05421837_106360 | SAMN05421837_1167 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.405 |
SEF32643.1 | SEF37910.1 | SAMN05421837_106360 | SAMN05421837_11688 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.726 |
SEF32643.1 | thyA | SAMN05421837_106360 | SAMN05421837_101382 | Dihydrofolate reductase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.493 |
SEF32650.1 | SEF32643.1 | SAMN05421837_106364 | SAMN05421837_106360 | RibD C-terminal domain-containing protein. | Dihydrofolate reductase. | 0.566 |
SEF32650.1 | SEF37358.1 | SAMN05421837_106364 | SAMN05421837_113186 | RibD C-terminal domain-containing protein. | 5-amino-6-(5-phosphoribosylamino)uracil reductase. | 0.665 |
SEF32650.1 | SEF37910.1 | SAMN05421837_106364 | SAMN05421837_11688 | RibD C-terminal domain-containing protein. | Dihydrofolate reductase. | 0.741 |
SEF32650.1 | SEF38264.1 | SAMN05421837_106364 | SAMN05421837_11998 | RibD C-terminal domain-containing protein. | Dihydrofolate reductase. | 0.502 |
SEF32650.1 | gcvP | SAMN05421837_106364 | SAMN05421837_1011347 | RibD C-terminal domain-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.631 |
SEF32650.1 | gcvP-2 | SAMN05421837_106364 | SAMN05421837_108319 | RibD C-terminal domain-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.631 |
SEF32650.1 | thyA | SAMN05421837_106364 | SAMN05421837_101382 | RibD C-terminal domain-containing protein. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.803 |
SEF35970.1 | SEF32643.1 | SAMN05421837_109127 | SAMN05421837_106360 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.402 |
SEF35970.1 | SEF37358.1 | SAMN05421837_109127 | SAMN05421837_113186 | Dihydrofolate reductase. | 5-amino-6-(5-phosphoribosylamino)uracil reductase. | 0.665 |
SEF35970.1 | SEF37910.1 | SAMN05421837_109127 | SAMN05421837_11688 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.661 |
SEF35970.1 | gcvP | SAMN05421837_109127 | SAMN05421837_1011347 | Dihydrofolate reductase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.640 |
SEF35970.1 | gcvP-2 | SAMN05421837_109127 | SAMN05421837_108319 | Dihydrofolate reductase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.679 |
SEF35970.1 | thyA | SAMN05421837_109127 | SAMN05421837_101382 | Dihydrofolate reductase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.824 |
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