A0A2G5C189 protein (Aquilegia coerulea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2G5C189

Uncharacterized protein. (930 aa)

Predicted Functional Partners:

A0A2G5CRW6

0.878

A0A2G5EF04

0.856

A0A2G5DMQ6

0.851

A0A2G5DN79

0.850

A0A2G5DQP8

0.845

A0A2G5C3H9

0.789

A0A2G5DXW3

0.789

A0A2G5EK71

0.789

A0A2G5F2V8

0.789

A0A2G5ESS4

0.761

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5C189	A0A2G5C3H9	Uncharacterized protein.	Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.	0.789
A0A2G5C189	A0A2G5CRW6	Uncharacterized protein.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.878
A0A2G5C189	A0A2G5DMQ6	Uncharacterized protein.	Uncharacterized protein.	0.851
A0A2G5C189	A0A2G5DN79	Uncharacterized protein.	Uncharacterized protein.	0.850
A0A2G5C189	A0A2G5DQP8	Uncharacterized protein.	Uncharacterized protein.	0.845
A0A2G5C189	A0A2G5DXW3	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.789
A0A2G5C189	A0A2G5EF04	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A2G5C189	A0A2G5EK71	Uncharacterized protein.	Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.	0.789
A0A2G5C189	A0A2G5ESS4	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.761
A0A2G5C189	A0A2G5F2V8	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.789
A0A2G5C3H9	A0A2G5C189	Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.789
A0A2G5C3H9	A0A2G5CRW6	Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.715
A0A2G5C3H9	A0A2G5DMQ6	Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.716
A0A2G5C3H9	A0A2G5DN79	Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.711
A0A2G5C3H9	A0A2G5DQP8	Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.702
A0A2G5C3H9	A0A2G5DXW3	Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.679
A0A2G5C3H9	A0A2G5EF04	Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.717
A0A2G5C3H9	A0A2G5ESS4	Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.673
A0A2G5C3H9	A0A2G5F2V8	Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.679
A0A2G5CRW6	A0A2G5C189	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	Uncharacterized protein.	0.878