A0A2G5CA56 protein (Aquilegia coerulea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2G5CA56

AA_permease_C domain-containing protein. (527 aa)

Predicted Functional Partners:

A0A2G5CKQ0

0.492

A0A2G5CS54

0.492

A0A2G5DM61

0.492

A0A2G5DM85

0.492

A0A2G5E2Q7

0.492

A0A2G5F0Z0

0.492

A0A2G5F141

0.492

A0A2G5C2S7

0.466

A0A2G5CNL3

0.466

A0A2G5CTC2

0.466

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5C2S7	A0A2G5CA56	Fe2OG dioxygenase domain-containing protein.	AA_permease_C domain-containing protein.	0.466
A0A2G5CA56	A0A2G5C2S7	AA_permease_C domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.466
A0A2G5CA56	A0A2G5CKQ0	AA_permease_C domain-containing protein.	DHQ_synthase domain-containing protein.	0.492
A0A2G5CA56	A0A2G5CNL3	AA_permease_C domain-containing protein.	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	0.466
A0A2G5CA56	A0A2G5CS54	AA_permease_C domain-containing protein.	EPSP_synthase domain-containing protein.	0.492
A0A2G5CA56	A0A2G5CTC2	AA_permease_C domain-containing protein.	Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.	0.466
A0A2G5CA56	A0A2G5DM61	AA_permease_C domain-containing protein.	Uncharacterized protein.	0.492
A0A2G5CA56	A0A2G5DM85	AA_permease_C domain-containing protein.	Uncharacterized protein.	0.492
A0A2G5CA56	A0A2G5E2Q7	AA_permease_C domain-containing protein.	3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.	0.492
A0A2G5CA56	A0A2G5F0Z0	AA_permease_C domain-containing protein.	Uncharacterized protein.	0.492
A0A2G5CA56	A0A2G5F141	AA_permease_C domain-containing protein.	Uncharacterized protein.	0.492
A0A2G5CKQ0	A0A2G5CA56	DHQ_synthase domain-containing protein.	AA_permease_C domain-containing protein.	0.492
A0A2G5CKQ0	A0A2G5DM61	DHQ_synthase domain-containing protein.	Uncharacterized protein.	0.966
A0A2G5CKQ0	A0A2G5DM85	DHQ_synthase domain-containing protein.	Uncharacterized protein.	0.898
A0A2G5CKQ0	A0A2G5E2Q7	DHQ_synthase domain-containing protein.	3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.	0.939
A0A2G5CKQ0	A0A2G5F0Z0	DHQ_synthase domain-containing protein.	Uncharacterized protein.	0.894
A0A2G5CKQ0	A0A2G5F141	DHQ_synthase domain-containing protein.	Uncharacterized protein.	0.938
A0A2G5CNL3	A0A2G5CA56	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	AA_permease_C domain-containing protein.	0.466
A0A2G5CNL3	A0A2G5CTC2	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.	0.502
A0A2G5CS54	A0A2G5CA56	EPSP_synthase domain-containing protein.	AA_permease_C domain-containing protein.	0.492