A0A2G5CAG4 protein (Aquilegia coerulea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2G5CAG4

Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)

Predicted Functional Partners:

A0A2G5CTI4

0.996

A0A2G5DWX8

0.996

A0A2G5EFC9

0.996

A0A2G5ELF4

0.996

A0A2G5CVH6

0.995

A0A2G5CEJ3

0.994

A0A2G5C3L9

0.991

A0A2G5CS79

0.991

A0A2G5CR17

0.990

A0A2G5DNB8

0.990

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5C3L9	A0A2G5CAG4	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.991
A0A2G5C3L9	A0A2G5CEJ3	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
A0A2G5C3L9	A0A2G5CR17	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.998
A0A2G5C3L9	A0A2G5CS79	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
A0A2G5C3L9	A0A2G5CTI4	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_L18_c domain-containing protein.	0.999
A0A2G5C3L9	A0A2G5CVH6	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.999
A0A2G5C3L9	A0A2G5DNB8	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
A0A2G5C3L9	A0A2G5DWX8	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_L7Ae domain-containing protein.	0.999
A0A2G5C3L9	A0A2G5EFC9	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
A0A2G5C3L9	A0A2G5ELF4	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribos_L4_asso_C domain-containing protein.	0.999
A0A2G5CAG4	A0A2G5C3L9	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.991
A0A2G5CAG4	A0A2G5CEJ3	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.994
A0A2G5CAG4	A0A2G5CR17	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.990
A0A2G5CAG4	A0A2G5CS79	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.991
A0A2G5CAG4	A0A2G5CTI4	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	Ribosomal_L18_c domain-containing protein.	0.996
A0A2G5CAG4	A0A2G5CVH6	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.995
A0A2G5CAG4	A0A2G5DNB8	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.990
A0A2G5CAG4	A0A2G5DWX8	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	Ribosomal_L7Ae domain-containing protein.	0.996
A0A2G5CAG4	A0A2G5EFC9	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	Uncharacterized protein.	0.996
A0A2G5CAG4	A0A2G5ELF4	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	Ribos_L4_asso_C domain-containing protein.	0.996