A0A2G5CFS3 protein (Aquilegia coerulea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2G5CFS3

Uncharacterized protein. (316 aa)

Predicted Functional Partners:

A0A2G5EV10

0.877

A0A2G5EZ19

0.872

A0A2G5EUH1

0.843

A0A2G5CK41

0.807

A0A2G5E2T1

0.807

A0A2G5DC35

0.777

A0A2G5ED01

0.774

A0A2G5EFC0

0.716

A0A2G5CXC6

0.693

A0A2G5CH13

0.692

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5CFS3	A0A2G5CH13	Uncharacterized protein.	Uncharacterized protein.	0.692
A0A2G5CFS3	A0A2G5CK41	Uncharacterized protein.	Uncharacterized protein; Belongs to the RecA family.	0.807
A0A2G5CFS3	A0A2G5CXC6	Uncharacterized protein.	Zinc-hook domain-containing protein.	0.693
A0A2G5CFS3	A0A2G5DC35	Uncharacterized protein.	RECA_2 domain-containing protein.	0.777
A0A2G5CFS3	A0A2G5E2T1	Uncharacterized protein.	RECA_2 domain-containing protein.	0.807
A0A2G5CFS3	A0A2G5ED01	Uncharacterized protein.	ERCC4 domain-containing protein.	0.774
A0A2G5CFS3	A0A2G5EFC0	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.716
A0A2G5CFS3	A0A2G5EUH1	Uncharacterized protein.	RECA_2 domain-containing protein.	0.843
A0A2G5CFS3	A0A2G5EV10	Uncharacterized protein.	Tower domain-containing protein.	0.877
A0A2G5CFS3	A0A2G5EZ19	Uncharacterized protein.	3'-5' exonuclease domain-containing protein.	0.872
A0A2G5CH13	A0A2G5CFS3	Uncharacterized protein.	Uncharacterized protein.	0.692
A0A2G5CH13	A0A2G5CK41	Uncharacterized protein.	Uncharacterized protein; Belongs to the RecA family.	0.754
A0A2G5CH13	A0A2G5CXC6	Uncharacterized protein.	Zinc-hook domain-containing protein.	0.940
A0A2G5CH13	A0A2G5DC35	Uncharacterized protein.	RECA_2 domain-containing protein.	0.730
A0A2G5CH13	A0A2G5E2T1	Uncharacterized protein.	RECA_2 domain-containing protein.	0.754
A0A2G5CH13	A0A2G5ED01	Uncharacterized protein.	ERCC4 domain-containing protein.	0.742
A0A2G5CH13	A0A2G5EFC0	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.599
A0A2G5CH13	A0A2G5EUH1	Uncharacterized protein.	RECA_2 domain-containing protein.	0.785
A0A2G5CH13	A0A2G5EV10	Uncharacterized protein.	Tower domain-containing protein.	0.983
A0A2G5CH13	A0A2G5EZ19	Uncharacterized protein.	3'-5' exonuclease domain-containing protein.	0.902