STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5CUL9DNA_MISMATCH_REPAIR_2 domain-containing protein. (655 aa)    
Predicted Functional Partners:
A0A2G5CS79
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.705
A0A2G5D1X7
Uncharacterized protein.
    
   0.705
A0A2G5DG47
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.705
A0A2G5CZE3
Uncharacterized protein.
   
 
 0.666
A0A2G5E024
Uncharacterized protein.
   
 
 0.666
A0A2G5CDV6
Uncharacterized protein.
   
   0.663
A0A2G5CRE8
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
   0.663
A0A2G5C3Y2
Ribosomal_S4 domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
    
   0.630
A0A2G5F1U1
S4 RNA-binding domain-containing protein.
    
   0.630
A0A2G5F823
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
    
   0.630
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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