STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5D1U6HIT-type domain-containing protein. (187 aa)    
Predicted Functional Partners:
A0A2G5CBD4
YL1_C domain-containing protein.
    
 
 0.963
A0A2G5CKL6
Uncharacterized protein.
    
 
 0.963
A0A2G5CGD2
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.954
A0A2G5EPH9
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.954
A0A2G5D7S7
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.953
A0A2G5F2E9
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.953
A0A2G5CTG5
Uncharacterized protein; Belongs to the actin family.
    
 
 0.930
A0A2G5CX31
Uncharacterized protein; Belongs to the actin family.
    
 
 0.930
A0A2G5CNW6
Histone H2A; Belongs to the histone H2A family.
    
 
 0.929
A0A2G5CM18
SANT_DAMP1_like domain-containing protein.
    
 
 0.922
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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