STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5D369WD_REPEATS_REGION domain-containing protein. (1425 aa)    
Predicted Functional Partners:
A0A2G5D883
WD_REPEATS_REGION domain-containing protein.
   
    0.982
A0A2G5CLQ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
 
 0.972
A0A2G5F6P9
Uncharacterized protein.
   
    0.950
A0A2G5C9L1
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.940
A0A2G5EG30
FtsJ domain-containing protein.
   
 
 0.940
A0A2G5E820
WD_REPEATS_REGION domain-containing protein.
   
    0.837
A0A2G5D314
Ribosomal_L7Ae domain-containing protein.
   
    0.836
A0A2G5EG38
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.836
A0A2G5DWH1
Uncharacterized protein.
   
    0.835
A0A2G5DPE8
Structural maintenance of chromosomes protein.
   
    0.807
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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