STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5DGZ3Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (721 aa)    
Predicted Functional Partners:
A0A2G5C435
DUF5311 domain-containing protein.
  
 0.991
A0A2G5DHM2
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.990
A0A2G5E5Z3
Nup54 domain-containing protein.
  
 0.990
A0A2G5CLN8
Uncharacterized protein.
  
 0.989
A0A2G5CTN0
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.988
A0A2G5DXV1
Nuclear pore protein.
   
 0.988
A0A2G5DHU4
Uncharacterized protein.
   
 0.980
A0A2G5DRE6
Uncharacterized protein.
  
 0.980
A0A2G5F3M1
Uncharacterized protein.
  
 0.980
A0A2G5E0M4
Uncharacterized protein.
   
 0.973
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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