STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5DQB4WD_REPEATS_REGION domain-containing protein. (467 aa)    
Predicted Functional Partners:
A0A2G5DDT6
CPSF_A domain-containing protein.
    
 0.975
A0A2G5DDR7
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.947
A0A2G5C5E7
Uncharacterized protein.
   
 0.913
A0A2G5C5W0
RPA_C domain-containing protein.
    
 0.909
A0A2G5DBE0
MPN domain-containing protein.
    
 0.886
A0A2G5DKY9
WD_REPEATS_REGION domain-containing protein.
    
 0.878
A0A2G5D8M0
Uncharacterized protein.
     
 0.872
A0A2G5E9X7
PCI domain-containing protein.
    
 0.868
A0A2G5DYR8
PCI domain-containing protein.
    
 0.859
A0A2G5C8N2
RING-type domain-containing protein.
    
 0.841
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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