STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5DTW1Uncharacterized protein; Belongs to the synaptobrevin family. (258 aa)    
Predicted Functional Partners:
A0A2G5EEA8
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.995
A0A2G5CLI6
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.994
A0A2G5CWV1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.994
A0A2G5DQF1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.994
A0A2G5ESI2
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.994
A0A2G5F4H8
V-SNARE domain-containing protein.
    
 0.994
A0A2G5F966
V-SNARE domain-containing protein.
    
 0.994
A0A2G5FB09
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.994
A0A2G5D052
Uncharacterized protein.
    
 0.993
A0A2G5E6J7
YqaJ domain-containing protein.
   
 0.993
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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