STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5DVM1Beta-galactosidase. (822 aa)    
Predicted Functional Partners:
A0A2G5DXA2
Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
  
 0.665
A0A2G5CBC7
Xylose isomerase.
    
 0.581
A0A2G5F9E3
Uncharacterized protein.
   
 
 0.575
A0A2G5DY33
Uncharacterized protein.
     
 0.548
A0A2G5C102
PfkB domain-containing protein; Belongs to the carbohydrate kinase PfkB family.
     
 0.464
A0A2G5C272
PfkB domain-containing protein; Belongs to the carbohydrate kinase PfkB family.
     
 0.464
A0A2G5C4R2
PfkB domain-containing protein.
     
 0.464
A0A2G5CD75
PfkB domain-containing protein.
     
 0.464
A0A2G5CFN0
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
     
 0.464
A0A2G5CPQ8
PfkB domain-containing protein.
     
 0.464
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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