STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5DWT8Methyltransf_11 domain-containing protein. (387 aa)    
Predicted Functional Partners:
A0A2G5E8T3
Uncharacterized protein.
   
 0.975
A0A2G5F6U8
Uncharacterized protein.
 
    
 0.874
A0A2G5CU01
Uncharacterized protein.
   
 0.814
A0A2G5EM03
Bms1-type G domain-containing protein.
   
  0.701
A0A2G5CCT0
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.684
A0A2G5D6J8
KH domain-containing protein.
   
  0.668
A0A2G5F9L2
Uncharacterized protein.
   
 0.662
A0A2G5DNB8
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.633
A0A2G5DYF2
RIO domain-containing protein.
   
 
  0.619
A0A2G5DCL8
Uncharacterized protein.
   
 0.610
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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