STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5DZK2Uncharacterized protein. (652 aa)    
Predicted Functional Partners:
A0A2G5CV40
Nuclear cap-binding protein subunit 2.
    
 0.738
A0A2G5DLU6
MIF4G domain-containing protein.
   
 0.721
A0A2G5F1P4
Uncharacterized protein.
   
  0.643
A0A2G5EZH6
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.626
A0A2G5DWL1
RPOL4c domain-containing protein.
    
  0.619
A0A2G5DML3
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 
  0.608
A0A2G5D3Y8
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
  0.594
A0A2G5CLW1
Uncharacterized protein.
    
 
 0.577
A0A2G5CQ37
Uncharacterized protein.
    
   0.570
A0A2G5F3P9
RPOL4c domain-containing protein.
    
  0.530
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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