STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5E3H8Autophagy-related protein 3. (314 aa)    
Predicted Functional Partners:
A0A2G5CGM5
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
    
 0.999
A0A2G5C8W2
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
    
 0.995
A0A2G5F7L6
Autophagy protein 5; Required for autophagy.
   
 0.995
A0A2G5D372
Autophagy-related protein.
   
 0.989
A0A2G5CG87
WD_REPEATS_REGION domain-containing protein.
   
 0.988
A0A2G5E6W0
WD_REPEATS_REGION domain-containing protein.
   
 0.988
A0A2G5C047
Uncharacterized protein.
   
 0.985
A0A2G5CWR2
Autophagy-related protein.
   
 0.985
A0A2G5E5E6
Autophagy-related protein.
   
 0.985
A0A2G5EQ08
Autophagy-related protein.
   
 0.985
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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