STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5EHS3Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (174 aa)    
Predicted Functional Partners:
A0A2G5CBB5
Uncharacterized protein.
   
 
 0.604
A0A2G5CMZ7
Uncharacterized protein.
   
 
 0.604
A0A2G5CEY4
Uncharacterized protein.
   
 
 0.543
A0A2G5CLI6
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.489
A0A2G5FB09
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.489
A0A2G5DTW1
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.463
A0A2G5E3U5
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.438
A0A2G5EJS7
H15 domain-containing protein.
      
 0.414
A0A2G5CRW6
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
      
 0.407
A0A2G5DGK2
EXS domain-containing protein.
      
 0.407
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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