STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5EZE7Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)    
Predicted Functional Partners:
A0A2G5CFH4
WD_REPEATS_REGION domain-containing protein.
   
 0.982
A0A2G5DZF7
WD_REPEATS_REGION domain-containing protein.
   
 0.968
A0A2G5EGI7
WD_REPEATS_REGION domain-containing protein.
   
 0.968
A0A2G5CAF6
Uncharacterized protein.
   
 0.924
A0A2G5CTN9
Uncharacterized protein.
   
 0.924
A0A2G5ETS1
Protein transport protein sec16.
    
 0.884
A0A2G5F2Q5
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.881
A0A2G5F9R8
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.881
A0A2G5CJP5
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.869
A0A2G5CEV4
Uncharacterized protein.
    
 0.868
Your Current Organism:
Aquilegia coerulea
NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine
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