A0A2G5F514 protein (Aquilegia coerulea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2G5F514

Uncharacterized protein. (516 aa)

Predicted Functional Partners:

A0A2G5CD96

0.916

A0A2G5CYK5

0.845

A0A2G5CRL8

0.833

A0A2G5F5J0

0.817

A0A2G5ETK4

0.813

A0A2G5CUM4

0.809

A0A2G5DF66

0.808

A0A2G5EV47

0.808

A0A2G5FA04

0.808

A0A2G5CWL5

0.805

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5CD96	A0A2G5CRL8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.800
A0A2G5CD96	A0A2G5CUM4	Uncharacterized protein.	Uncharacterized protein.	0.800
A0A2G5CD96	A0A2G5CWL5	Uncharacterized protein.	Uncharacterized protein.	0.809
A0A2G5CD96	A0A2G5CYK5	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.818
A0A2G5CD96	A0A2G5DF66	Uncharacterized protein.	Uncharacterized protein.	0.800
A0A2G5CD96	A0A2G5ETK4	Uncharacterized protein.	Uncharacterized protein.	0.809
A0A2G5CD96	A0A2G5EV47	Uncharacterized protein.	Uncharacterized protein.	0.809
A0A2G5CD96	A0A2G5F514	Uncharacterized protein.	Uncharacterized protein.	0.916
A0A2G5CD96	A0A2G5F5J0	Uncharacterized protein.	Uncharacterized protein.	0.828
A0A2G5CD96	A0A2G5FA04	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.801
A0A2G5CRL8	A0A2G5CD96	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.800
A0A2G5CRL8	A0A2G5CUM4	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.813
A0A2G5CRL8	A0A2G5CWL5	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.940
A0A2G5CRL8	A0A2G5CYK5	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.972
A0A2G5CRL8	A0A2G5DF66	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.819
A0A2G5CRL8	A0A2G5ETK4	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.983
A0A2G5CRL8	A0A2G5EV47	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.936
A0A2G5CRL8	A0A2G5F514	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.833
A0A2G5CRL8	A0A2G5F5J0	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.800
A0A2G5CRL8	A0A2G5FA04	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.982