STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000820125_01170Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_000820125_00661
Unannotated protein.
 
  
 0.829
GCA_000820125_00665
Unannotated protein.
  
  
  0.824
GCA_000820125_01780
Unannotated protein.
  
 
 0.768
GCA_000820125_00260
Unannotated protein.
    
 0.758
GCA_000820125_02716
Unannotated protein.
   
 0.720
GCA_000820125_01536
Unannotated protein.
    
  0.719
GCA_000820125_02606
Unannotated protein.
    
  0.719
GCA_000820125_02607
Unannotated protein.
    
  0.719
GCA_000820125_00703
Unannotated protein.
  
 
 0.695
GCA_000820125_01624
Unannotated protein.
   
 0.667
Your Current Organism:
Aeromonas simiae
NCBI taxonomy Id: 218936
Other names: A. simiae, Aeromonas simiae Harf-Monteil et al. 2004, CCUG 47378, CIP 107798, IBS S6874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.