STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000820125_01441Unannotated protein. (238 aa)    
Predicted Functional Partners:
GCA_000820125_01442
Unannotated protein.
     0.931
GCA_000820125_00031
Unannotated protein.
    
  0.808
GCA_000820125_01863
Unannotated protein.
    
 0.745
GCA_000820125_01443
Unannotated protein.
 
     0.669
GCA_000820125_00491
Unannotated protein.
   
 
 0.640
GCA_000820125_02794
Unannotated protein.
   
    0.571
GCA_000820125_00773
Unannotated protein.
    
  0.569
GCA_000820125_00738
Unannotated protein.
    
  0.546
GCA_000820125_02143
Unannotated protein.
 
 
  0.541
GCA_000820125_02303
Unannotated protein.
 
 
  0.499
Your Current Organism:
Aeromonas simiae
NCBI taxonomy Id: 218936
Other names: A. simiae, Aeromonas simiae Harf-Monteil et al. 2004, CCUG 47378, CIP 107798, IBS S6874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.