STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000820125_02485Unannotated protein. (454 aa)    
Predicted Functional Partners:
GCA_000820125_01613
Unannotated protein.
 
 0.978
GCA_000820125_02486
Unannotated protein.
 
 0.968
GCA_000820125_01569
Unannotated protein.
 
 0.960
GCA_000820125_02800
Unannotated protein.
 
0.934
GCA_000820125_01614
Unannotated protein.
 
0.910
GCA_000820125_00034
Unannotated protein.
 
 0.866
GCA_000820125_02441
Unannotated protein.
 
 0.840
GCA_000820125_00090
Unannotated protein.
 
 0.837
GCA_000820125_02610
Unannotated protein.
 
 0.834
GCA_000820125_00824
Unannotated protein.
 
 0.831
Your Current Organism:
Aeromonas simiae
NCBI taxonomy Id: 218936
Other names: A. simiae, Aeromonas simiae Harf-Monteil et al. 2004, CCUG 47378, CIP 107798, IBS S6874
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.