STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000820125_03002Unannotated protein. (116 aa)    
Predicted Functional Partners:
GCA_000820125_03000
Unannotated protein.
  
  
 0.903
GCA_000820125_02999
Unannotated protein.
  
  
 0.662
GCA_000820125_03001
Unannotated protein.
       0.604
GCA_000820125_02998
Unannotated protein.
     
 0.561
GCA_000820125_02457
Unannotated protein.
    
  0.547
GCA_000820125_03003
Unannotated protein.
   
   0.528
GCA_000820125_02997
Unannotated protein.
       0.496
GCA_000820125_03267
Unannotated protein.
   
  0.479
GCA_000820125_02162
Unannotated protein.
  
 
 0.471
GCA_000820125_00820
Unannotated protein.
   
  0.457
Your Current Organism:
Aeromonas simiae
NCBI taxonomy Id: 218936
Other names: A. simiae, Aeromonas simiae Harf-Monteil et al. 2004, CCUG 47378, CIP 107798, IBS S6874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.