STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP69840.1Hypothetical protein. (267 aa)    
Predicted Functional Partners:
EEP70893.1
Hypothetical protein.
 
     0.591
rbpA-2
Electron transfer protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.489
EEP69839.1
Hypothetical protein.
       0.484
EEP70007.1
Hypothetical protein.
  
     0.471
EEP70903.1
Hypothetical protein.
  
     0.466
EEP72071.1
Hypothetical protein.
  
     0.445
EEP71412.1
Hypothetical protein.
  
     0.439
EEP75289.1
Hypothetical protein.
  
     0.436
EEP69841.1
Xylulokinase; Belongs to the FGGY kinase family.
       0.435
EEP71069.1
PucR family transcriptional regulator.
  
     0.402
Your Current Organism:
Micromonospora sp. ATCC 39149
NCBI taxonomy Id: 219305
Other names: M. sp. ATCC 39149, Micromonospora carbonacea var. africana, Micromonospora sp. NRRL 15099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.