Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEP70005.1 | EEP70461.1 | MCAG_00332 | MCAG_00788 | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | Hypothetical protein. | 0.738 |
EEP70005.1 | EEP70462.1 | MCAG_00332 | MCAG_00789 | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | Conserved hypothetical protein. | 0.738 |
EEP70005.1 | EEP71022.1 | MCAG_00332 | MCAG_01349 | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | Truncated CDS. | 0.435 |
EEP70005.1 | EEP71689.1 | MCAG_00332 | MCAG_02016 | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | Carbohydrate kinase; Truncated CDS; unextendable partial coding region. | 0.978 |
EEP70005.1 | rph | MCAG_00332 | MCAG_04098 | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.818 |
EEP70461.1 | EEP70005.1 | MCAG_00788 | MCAG_00332 | Hypothetical protein. | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | 0.738 |
EEP70461.1 | EEP70462.1 | MCAG_00788 | MCAG_00789 | Hypothetical protein. | Conserved hypothetical protein. | 0.943 |
EEP70461.1 | EEP71022.1 | MCAG_00788 | MCAG_01349 | Hypothetical protein. | Truncated CDS. | 0.819 |
EEP70461.1 | EEP71573.1 | MCAG_00788 | MCAG_01900 | Hypothetical protein. | ATP-dependent RNA helicase. | 0.738 |
EEP70461.1 | EEP71689.1 | MCAG_00788 | MCAG_02016 | Hypothetical protein. | Carbohydrate kinase; Truncated CDS; unextendable partial coding region. | 0.975 |
EEP70461.1 | EEP71839.1 | MCAG_00788 | MCAG_02166 | Hypothetical protein. | DEAD/DEAH box helicase domain-containing protein; Truncated CDS; unextendable partial coding region; Belongs to the DEAD box helicase family. | 0.738 |
EEP70461.1 | EEP72800.1 | MCAG_00788 | MCAG_03127 | Hypothetical protein. | GAF sensor hybrid histidine kinase. | 0.690 |
EEP70461.1 | EEP72818.1 | MCAG_00788 | MCAG_03145 | Hypothetical protein. | RNA helicase. | 0.738 |
EEP70461.1 | ribBA | MCAG_00788 | MCAG_04903 | Hypothetical protein. | Riboflavin biosynthesis protein ribBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.694 |
EEP70461.1 | rph | MCAG_00788 | MCAG_04098 | Hypothetical protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.747 |
EEP70462.1 | EEP70005.1 | MCAG_00789 | MCAG_00332 | Conserved hypothetical protein. | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | 0.738 |
EEP70462.1 | EEP70461.1 | MCAG_00789 | MCAG_00788 | Conserved hypothetical protein. | Hypothetical protein. | 0.943 |
EEP70462.1 | EEP71022.1 | MCAG_00789 | MCAG_01349 | Conserved hypothetical protein. | Truncated CDS. | 0.822 |
EEP70462.1 | EEP71573.1 | MCAG_00789 | MCAG_01900 | Conserved hypothetical protein. | ATP-dependent RNA helicase. | 0.738 |
EEP70462.1 | EEP71689.1 | MCAG_00789 | MCAG_02016 | Conserved hypothetical protein. | Carbohydrate kinase; Truncated CDS; unextendable partial coding region. | 0.975 |
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