STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP70528.1ABC transporter related. (254 aa)    
Predicted Functional Partners:
EEP70342.1
Hypothetical protein.
 0.987
EEP70527.1
Hypothetical protein.
 
 
 0.960
EEP72298.1
Hypothetical protein.
  
  0.957
EEP73059.1
ABC transporter permease component.
 
  0.845
EEP69995.1
Hypothetical protein.
 
 
 0.825
EEP75163.1
Hypothetical protein.
 
 
 0.825
EEP70405.1
Hypothetical protein.
 
 
 0.824
EEP70340.1
Peptidoglycan-binding protein.
  
 0.809
EEP74014.1
Hypothetical protein.
  
  0.719
EEP74183.1
Hypothetical protein.
  
  0.706
Your Current Organism:
Micromonospora sp. ATCC 39149
NCBI taxonomy Id: 219305
Other names: M. sp. ATCC 39149, Micromonospora carbonacea var. africana, Micromonospora sp. NRRL 15099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.