STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP71091.1Hypothetical protein. (612 aa)    
Predicted Functional Partners:
EEP72425.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.746
EEP72680.1
Hypothetical protein.
  
     0.726
EEP72063.1
Hypothetical protein.
  
     0.711
EEP70871.1
Hypothetical protein.
  
     0.705
EEP71086.1
Hypothetical protein.
  
     0.677
EEP73196.1
Hypothetical protein.
  
     0.647
EEP72094.1
Hypothetical protein.
 
     0.623
EEP71834.1
Hypothetical protein.
  
     0.617
EEP72877.1
Hypothetical protein.
  
     0.608
EEP72544.1
parB partition protein; Belongs to the ParB family.
    
 
 0.607
Your Current Organism:
Micromonospora sp. ATCC 39149
NCBI taxonomy Id: 219305
Other names: M. sp. ATCC 39149, Micromonospora carbonacea var. africana, Micromonospora sp. NRRL 15099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.