STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP71709.1ATPase. (1026 aa)    
Predicted Functional Partners:
EEP72800.1
GAF sensor hybrid histidine kinase.
  
 0.977
EEP71858.1
Two-component system sensor protein.
   
 0.967
EEP71708.1
Roadblock family protein.
 
   
 0.953
EEP71707.1
Hypothetical protein.
 
 
 0.928
EEP71706.1
ATP/GTP-binding protein.
 
  
 0.909
EEP71053.1
Transketolase.
    
 0.849
EEP73255.1
Hypothetical protein.
 
 
 0.802
EEP70729.1
Hypothetical protein.
 
 
 0.799
EEP71370.1
Hypothetical protein.
 
 
 0.799
EEP70634.1
Hypothetical protein.
 
   
 0.791
Your Current Organism:
Micromonospora sp. ATCC 39149
NCBI taxonomy Id: 219305
Other names: M. sp. ATCC 39149, Micromonospora carbonacea var. africana, Micromonospora sp. NRRL 15099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.