Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEP70924.1 | EEP70951.1 | MCAG_01251 | MCAG_01278 | DNA polymerase III, epsilon subunit. | Hypothetical protein. | 0.810 |
EEP70924.1 | EEP71096.1 | MCAG_01251 | MCAG_01423 | DNA polymerase III, epsilon subunit. | MerR family transcriptional regulator. | 0.954 |
EEP70924.1 | EEP71219.1 | MCAG_01251 | MCAG_01546 | DNA polymerase III, epsilon subunit. | DNA polymerase III, delta subunit. | 0.928 |
EEP70924.1 | EEP72166.1 | MCAG_01251 | MCAG_02493 | DNA polymerase III, epsilon subunit. | Hypothetical protein. | 0.895 |
EEP70924.1 | EEP72553.1 | MCAG_01251 | MCAG_02880 | DNA polymerase III, epsilon subunit. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.962 |
EEP70924.1 | EEP72909.1 | MCAG_01251 | MCAG_03236 | DNA polymerase III, epsilon subunit. | DNA polymerase III, delta prime subunit. | 0.895 |
EEP70924.1 | EEP72910.1 | MCAG_01251 | MCAG_03237 | DNA polymerase III, epsilon subunit. | DNA polymerase III, delta prime subunit. | 0.895 |
EEP70924.1 | EEP74498.1 | MCAG_01251 | MCAG_04825 | DNA polymerase III, epsilon subunit. | DNA polymerase III, alpha subunit. | 0.943 |
EEP70924.1 | dnaX | MCAG_01251 | MCAG_02494 | DNA polymerase III, epsilon subunit. | DNA polymerase III, gamma subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.895 |
EEP70951.1 | EEP70924.1 | MCAG_01278 | MCAG_01251 | Hypothetical protein. | DNA polymerase III, epsilon subunit. | 0.810 |
EEP70951.1 | EEP71096.1 | MCAG_01278 | MCAG_01423 | Hypothetical protein. | MerR family transcriptional regulator. | 0.937 |
EEP70951.1 | EEP71219.1 | MCAG_01278 | MCAG_01546 | Hypothetical protein. | DNA polymerase III, delta subunit. | 0.933 |
EEP70951.1 | EEP72166.1 | MCAG_01278 | MCAG_02493 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EEP70951.1 | EEP72517.1 | MCAG_01278 | MCAG_02844 | Hypothetical protein. | Single-strand binding protein. | 0.426 |
EEP70951.1 | EEP72553.1 | MCAG_01278 | MCAG_02880 | Hypothetical protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.916 |
EEP70951.1 | EEP72909.1 | MCAG_01278 | MCAG_03236 | Hypothetical protein. | DNA polymerase III, delta prime subunit. | 0.800 |
EEP70951.1 | EEP72910.1 | MCAG_01278 | MCAG_03237 | Hypothetical protein. | DNA polymerase III, delta prime subunit. | 0.773 |
EEP70951.1 | EEP74498.1 | MCAG_01278 | MCAG_04825 | Hypothetical protein. | DNA polymerase III, alpha subunit. | 0.926 |
EEP70951.1 | dnaX | MCAG_01278 | MCAG_02494 | Hypothetical protein. | DNA polymerase III, gamma subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.773 |
EEP71096.1 | EEP70924.1 | MCAG_01423 | MCAG_01251 | MerR family transcriptional regulator. | DNA polymerase III, epsilon subunit. | 0.954 |
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