STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP75302.1Hypothetical protein. (327 aa)    
Predicted Functional Partners:
EEP70720.1
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
   
  0.699
EEP71103.1
Secreted alpha-amylase.
    
  0.699
EEP71359.1
Alpha amylase, catalytic subdomain.
    
  0.699
EEP71472.1
Trehalose synthase.
    
  0.699
EEP73235.1
Alpha amylase, catalytic subdomain; Truncated CDS.
    
  0.699
EEP73240.1
Alpha-amylase.
    
  0.699
glgE
Alpha-amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
    
  0.699
EEP71018.1
NAD+ synthetase.
    
 0.649
EEP74430.1
Hypothetical protein.
 
     0.545
EEP69856.1
Hypothetical protein.
    
  0.527
Your Current Organism:
Micromonospora sp. ATCC 39149
NCBI taxonomy Id: 219305
Other names: M. sp. ATCC 39149, Micromonospora carbonacea var. africana, Micromonospora sp. NRRL 15099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.