Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A7J50_0681 | A7J50_0682 | CztS; Member of a two-component regulatory system. | CztR; Pfam:pfam00072 Response regulator receiver domain. | 0.985 |
A7J50_0681 | A7J50_2927 | CztS; Member of a two-component regulatory system. | Pfam:pfam00072 Response regulator receiver domain. | 0.644 |
A7J50_0681 | A7J50_4359 | CztS; Member of a two-component regulatory system. | Two-component response regulator; Pfam:pfam00563 EAL domain. | 0.829 |
A7J50_0682 | A7J50_0681 | CztR; Pfam:pfam00072 Response regulator receiver domain. | CztS; Member of a two-component regulatory system. | 0.985 |
A7J50_0682 | A7J50_0957 | CztR; Pfam:pfam00072 Response regulator receiver domain. | Sensor histidine kinase; Member of a two-component regulatory system. | 0.934 |
A7J50_0682 | A7J50_1586 | CztR; Pfam:pfam00072 Response regulator receiver domain. | Pfam:pfam08521 Two-component sensor kinase N-terminal. | 0.721 |
A7J50_0682 | A7J50_1700 | CztR; Pfam:pfam00072 Response regulator receiver domain. | ATPase; Member of a two-component regulatory system. | 0.939 |
A7J50_0682 | A7J50_2456 | CztR; Pfam:pfam00072 Response regulator receiver domain. | Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.787 |
A7J50_0682 | A7J50_2893 | CztR; Pfam:pfam00072 Response regulator receiver domain. | Histidine kinase; Member of a two-component regulatory system. | 0.937 |
A7J50_0682 | A7J50_2927 | CztR; Pfam:pfam00072 Response regulator receiver domain. | Pfam:pfam00072 Response regulator receiver domain. | 0.739 |
A7J50_0682 | A7J50_3852 | CztR; Pfam:pfam00072 Response regulator receiver domain. | Histidine kinase; Member of a two-component regulatory system. | 0.936 |
A7J50_0682 | A7J50_4058 | CztR; Pfam:pfam00072 Response regulator receiver domain. | Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.713 |
A7J50_0682 | A7J50_4359 | CztR; Pfam:pfam00072 Response regulator receiver domain. | Two-component response regulator; Pfam:pfam00563 EAL domain. | 0.835 |
A7J50_0957 | A7J50_0682 | Sensor histidine kinase; Member of a two-component regulatory system. | CztR; Pfam:pfam00072 Response regulator receiver domain. | 0.934 |
A7J50_0957 | A7J50_2927 | Sensor histidine kinase; Member of a two-component regulatory system. | Pfam:pfam00072 Response regulator receiver domain. | 0.674 |
A7J50_0957 | A7J50_4359 | Sensor histidine kinase; Member of a two-component regulatory system. | Two-component response regulator; Pfam:pfam00563 EAL domain. | 0.652 |
A7J50_1586 | A7J50_0682 | Pfam:pfam08521 Two-component sensor kinase N-terminal. | CztR; Pfam:pfam00072 Response regulator receiver domain. | 0.721 |
A7J50_1586 | A7J50_2927 | Pfam:pfam08521 Two-component sensor kinase N-terminal. | Pfam:pfam00072 Response regulator receiver domain. | 0.654 |
A7J50_1586 | A7J50_4359 | Pfam:pfam08521 Two-component sensor kinase N-terminal. | Two-component response regulator; Pfam:pfam00563 EAL domain. | 0.829 |
A7J50_1700 | A7J50_0682 | ATPase; Member of a two-component regulatory system. | CztR; Pfam:pfam00072 Response regulator receiver domain. | 0.939 |
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